I've had at look at the DGN file and can see that the profiles match in View 2 and 3 as shown on the screenshot you loaded. I updated the reference path for the terrain and when I set the terrain as the Active Terrain the profile in View 3 corrected itself automatically.
Can you check if clearing the Active Terrain and resetting it the Active Terrain makes a difference to the profiles. Another thing to check is to recreate the Profiles from surface by manually selecting the Terrain model rather then using the Active Terrain.